Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Birc2-201ENSMUST00000054878 378 ntBASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.33□□□□□ -0.11
Smndc1Q8BGT7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smndc1Q8BGT7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Smndc1Q8BGT7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Gm12644-201ENSMUST00000119935 606 ntBASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smndc1Q8BGT7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Gm13312-201ENSMUST00000119631 718 ntBASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Gm5864-201ENSMUST00000202263 970 ntBASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Mzt1-203ENSMUST00000227948 952 ntBASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smndc1Q8BGT7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smndc1Q8BGT7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smndc1Q8BGT7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smndc1Q8BGT7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Smndc1Q8BGT7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smndc1Q8BGT7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smndc1Q8BGT7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms