Protein–RNA interactions for Protein: Q78IS1

Tmed3, Transmembrane emp24 domain-containing protein 3, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed3Q78IS1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmed3Q78IS1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Tmed3Q78IS1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tmed3Q78IS1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tmed3Q78IS1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Tmed3Q78IS1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gm37025-201ENSMUST00000195159 829 ntBASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gm10033-202ENSMUST00000211874 928 ntBASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.33□□□□□ -0.44
Tmed3Q78IS1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tmed3Q78IS1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm26571-201ENSMUST00000181399 666 ntBASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm5408-201ENSMUST00000197998 747 ntBASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm7514-201ENSMUST00000209475 934 ntBASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.32□□□□□ -0.44
Tmed3Q78IS1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tmed3Q78IS1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms