Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm22191-201ENSMUST00000103831 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm24721-201ENSMUST00000103849 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm28018-201ENSMUST00000103869 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm26399-201ENSMUST00000103937 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm25349-201ENSMUST00000177728 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm23616-201ENSMUST00000177797 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm25871-201ENSMUST00000177816 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm24752-201ENSMUST00000178240 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm24496-201ENSMUST00000178287 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm25649-201ENSMUST00000178476 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm25548-201ENSMUST00000178681 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm23147-201ENSMUST00000178841 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm26095-201ENSMUST00000179270 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm22171-201ENSMUST00000179283 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm23936-201ENSMUST00000179354 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm22619-201ENSMUST00000179516 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm25255-201ENSMUST00000179579 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm24755-201ENSMUST00000179691 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm26506-201ENSMUST00000179692 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm25086-201ENSMUST00000179931 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm23243-201ENSMUST00000180047 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm24659-201ENSMUST00000180212 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm24169-201ENSMUST00000180244 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm23689-201ENSMUST00000180354 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm27437-201ENSMUST00000183429 107 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm27359-201ENSMUST00000184153 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm27785-201ENSMUST00000184268 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm27466-201ENSMUST00000184396 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm27703-201ENSMUST00000184836 110 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Gm2423-201ENSMUST00000074863 733 ntBASIC15.29■□□□□ 0.04
Cspg5Q71M36 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg5Q71M36 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.28■□□□□ 0.04
Cspg5Q71M36 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Gm8318-201ENSMUST00000182954 872 ntBASIC15.28■□□□□ 0.04
Cspg5Q71M36 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg5Q71M36 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.28■□□□□ 0.04
Cspg5Q71M36 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Gm13223-201ENSMUST00000118609 747 ntBASIC15.27■□□□□ 0.04
Cspg5Q71M36 Gm13823-201ENSMUST00000119930 345 ntBASIC15.27■□□□□ 0.04
Cspg5Q71M36 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.27■□□□□ 0.04
Cspg5Q71M36 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.27■□□□□ 0.04
Cspg5Q71M36 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg5Q71M36 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cspg5Q71M36 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg5Q71M36 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cspg5Q71M36 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms