Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Gm12091-201ENSMUST00000146791 830 ntBASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Gm45384-201ENSMUST00000210451 277 ntBASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Gm5354-201ENSMUST00000182417 973 ntBASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup98Q6PFD9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Gm12341-201ENSMUST00000119724 503 ntBASIC17.1■□□□□ 0.33
Nup98Q6PFD9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup98Q6PFD9 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Gm15823-201ENSMUST00000064305 670 ntBASIC17.1■□□□□ 0.33
Nup98Q6PFD9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Gm9908-201ENSMUST00000211534 448 ntBASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Nup98Q6PFD9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms