Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Casc4Q6P2L7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Gm25911-201ENSMUST00000157621 56 ntBASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.9□□□□□ -0.02
Casc4Q6P2L7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Gm14822-201ENSMUST00000122247 291 ntBASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.89□□□□□ -0.03
Casc4Q6P2L7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Casc4Q6P2L7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms