Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.68□□□□□ -0.7
Ndufa4Q62425 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ndufa4Q62425 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Gm18032-201ENSMUST00000222541 538 ntBASIC10.68□□□□□ -0.7
Ndufa4Q62425 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa4Q62425 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Gm15358-201ENSMUST00000119249 520 ntBASIC10.67□□□□□ -0.7
Ndufa4Q62425 Gm11950-201ENSMUST00000121615 838 ntBASIC10.67□□□□□ -0.7
Ndufa4Q62425 Gm12497-201ENSMUST00000138778 237 ntBASIC10.67□□□□□ -0.7
Ndufa4Q62425 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Gm5587-201ENSMUST00000206270 674 ntBASIC10.67□□□□□ -0.7
Ndufa4Q62425 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.67□□□□□ -0.7
Ndufa4Q62425 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa4Q62425 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.66□□□□□ -0.7
Ndufa4Q62425 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.66□□□□□ -0.7
Ndufa4Q62425 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.66□□□□□ -0.7
Ndufa4Q62425 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ndufa4Q62425 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms