Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.41□□□□□ -0.1
Six3Q62233 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.41□□□□□ -0.1
Six3Q62233 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.4□□□□□ -0.1
Six3Q62233 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Gm27628-201ENSMUST00000184911 107 ntBASIC14.4□□□□□ -0.1
Six3Q62233 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.4□□□□□ -0.1
Six3Q62233 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.4□□□□□ -0.1
Six3Q62233 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.4□□□□□ -0.1
Six3Q62233 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.4□□□□□ -0.1
Six3Q62233 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Six3Q62233 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Six3Q62233 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.4□□□□□ -0.1
Six3Q62233 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six3Q62233 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Six3Q62233 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.4□□□□□ -0.11
Six3Q62233 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Six3Q62233 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Six3Q62233 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.39□□□□□ -0.11
Six3Q62233 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Six3Q62233 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.39□□□□□ -0.11
Six3Q62233 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.39□□□□□ -0.11
Six3Q62233 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.39□□□□□ -0.11
Six3Q62233 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.39□□□□□ -0.11
Six3Q62233 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.39□□□□□ -0.11
Six3Q62233 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.39□□□□□ -0.11
Six3Q62233 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.39□□□□□ -0.11
Six3Q62233 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.39□□□□□ -0.11
Six3Q62233 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.39□□□□□ -0.11
Six3Q62233 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.39□□□□□ -0.11
Six3Q62233 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.39□□□□□ -0.11
Six3Q62233 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.39□□□□□ -0.11
Six3Q62233 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Six3Q62233 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.39□□□□□ -0.11
Six3Q62233 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Six3Q62233 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six3Q62233 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.38□□□□□ -0.11
Six3Q62233 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Six3Q62233 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms