Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxd3Q61060 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Foxd3Q61060 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Foxd3Q61060 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.53□□□□□ -0.24
Foxd3Q61060 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Gm27628-201ENSMUST00000184911 107 ntBASIC13.53□□□□□ -0.24
Foxd3Q61060 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.53□□□□□ -0.24
Foxd3Q61060 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.53□□□□□ -0.24
Foxd3Q61060 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Foxd3Q61060 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxd3Q61060 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Foxd3Q61060 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.52□□□□□ -0.24
Foxd3Q61060 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.52□□□□□ -0.24
Foxd3Q61060 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Foxd3Q61060 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxd3Q61060 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Foxd3Q61060 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Gm12134-201ENSMUST00000122109 520 ntBASIC13.52□□□□□ -0.25
Foxd3Q61060 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.52□□□□□ -0.25
Foxd3Q61060 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.52□□□□□ -0.25
Foxd3Q61060 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Foxd3Q61060 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.52□□□□□ -0.25
Foxd3Q61060 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.52□□□□□ -0.25
Foxd3Q61060 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.52□□□□□ -0.25
Foxd3Q61060 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Foxd3Q61060 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Foxd3Q61060 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Foxd3Q61060 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.52□□□□□ -0.25
Foxd3Q61060 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms