Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ClpbQ60649 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
ClpbQ60649 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ClpbQ60649 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ClpbQ60649 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ClpbQ60649 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ClpbQ60649 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ClpbQ60649 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.14□□□□□ -0.15
ClpbQ60649 Gm12134-201ENSMUST00000122109 520 ntBASIC14.14□□□□□ -0.15
ClpbQ60649 Gm25911-201ENSMUST00000157621 56 ntBASIC14.14□□□□□ -0.15
ClpbQ60649 Gm5177-201ENSMUST00000183092 997 ntBASIC14.14□□□□□ -0.15
ClpbQ60649 Gm27301-201ENSMUST00000184012 127 ntBASIC14.14□□□□□ -0.15
ClpbQ60649 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.14□□□□□ -0.15
ClpbQ60649 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ClpbQ60649 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.14□□□□□ -0.15
ClpbQ60649 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClpbQ60649 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ClpbQ60649 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.13□□□□□ -0.15
ClpbQ60649 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.13□□□□□ -0.15
ClpbQ60649 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ClpbQ60649 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.13□□□□□ -0.15
ClpbQ60649 Thap2-203ENSMUST00000218989 527 ntBASIC14.13□□□□□ -0.15
ClpbQ60649 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ClpbQ60649 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClpbQ60649 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ClpbQ60649 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ClpbQ60649 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ClpbQ60649 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.12□□□□□ -0.15
ClpbQ60649 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ClpbQ60649 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Gm43575-201ENSMUST00000196420 516 ntBASIC14.12□□□□□ -0.15
ClpbQ60649 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.12□□□□□ -0.15
ClpbQ60649 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClpbQ60649 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms