Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.04□□□□□ -0.16
Nr1h4Q60641 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.04□□□□□ -0.16
Nr1h4Q60641 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.04□□□□□ -0.16
Nr1h4Q60641 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.04□□□□□ -0.16
Nr1h4Q60641 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1h4Q60641 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.03□□□□□ -0.16
Nr1h4Q60641 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Gm13836-201ENSMUST00000121159 501 ntBASIC14.03□□□□□ -0.16
Nr1h4Q60641 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.03□□□□□ -0.16
Nr1h4Q60641 Gm33142-201ENSMUST00000193913 867 ntBASIC14.03□□□□□ -0.16
Nr1h4Q60641 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.03□□□□□ -0.16
Nr1h4Q60641 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nr1h4Q60641 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nr1h4Q60641 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.02□□□□□ -0.17
Nr1h4Q60641 Gm11780-201ENSMUST00000136880 516 ntBASIC14.02□□□□□ -0.17
Nr1h4Q60641 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Nr1h4Q60641 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1h4Q60641 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.02□□□□□ -0.17
Nr1h4Q60641 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms