Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Mir3113-201ENSMUST00000175478 76 ntBASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl5Q3UTQ8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gm44492-201ENSMUST00000197012 141 ntBASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl5Q3UTQ8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Gm9385-201ENSMUST00000117563 472 ntBASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl5Q3UTQ8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms