Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Gm4909-201ENSMUST00000118749 794 ntBASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Gm27331-201ENSMUST00000183705 60 ntBASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Gm6916-202ENSMUST00000205523 195 ntBASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Olfr284-202ENSMUST00000206647 966 ntBASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Spg11Q3UHA3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Mir5120-201ENSMUST00000175020 78 ntBASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Gm27682-201ENSMUST00000183930 110 ntBASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Rarb-207ENSMUST00000225921 2756 ntBASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Gm14381-201ENSMUST00000122105 414 ntBASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Spg11Q3UHA3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm11803-201ENSMUST00000119966 444 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms