Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm10327-201ENSMUST00000105222 1002 ntBASIC20.53■□□□□ 0.88
Trpm1Q2TV84 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm27847-201ENSMUST00000183711 107 ntBASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm27375-201ENSMUST00000183799 107 ntBASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm27772-201ENSMUST00000184900 187 ntBASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Gm6152-201ENSMUST00000151704 340 ntBASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Gm8801-201ENSMUST00000173255 1064 ntBASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trpm1Q2TV84 CU024892.2-201ENSMUST00000224608 832 ntBASIC20.52■□□□□ 0.88
Trpm1Q2TV84 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpm1Q2TV84 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpm1Q2TV84 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpm1Q2TV84 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpm1Q2TV84 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpm1Q2TV84 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 AC161252.3-201ENSMUST00000225465 1549 ntBASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Gm38241-201ENSMUST00000192641 898 ntBASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Gm38002-201ENSMUST00000193255 180 ntBASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpm1Q2TV84 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpm1Q2TV84 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Gm37015-201ENSMUST00000192763 1521 ntBASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Gm7619-201ENSMUST00000210649 1282 ntBASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Gm6013-201ENSMUST00000212264 699 ntBASIC20.49■□□□□ 0.87
Trpm1Q2TV84 AC166997.1-201ENSMUST00000225122 572 ntBASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC20.49■□□□□ 0.87
Trpm1Q2TV84 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Gm43133-201ENSMUST00000197472 463 ntBASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Gm40466-201ENSMUST00000212174 422 ntBASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm1Q2TV84 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm1Q2TV84 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm1Q2TV84 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms