Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ptchd3Q0EEE2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Gm12008-201ENSMUST00000117791 755 ntBASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Gm8344-201ENSMUST00000119813 856 ntBASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Gm27459-201ENSMUST00000184860 107 ntBASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Gm17971-201ENSMUST00000190239 806 ntBASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ptchd3Q0EEE2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44357-201ENSMUST00000195897 142 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm19658-201ENSMUST00000196231 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44367-201ENSMUST00000196836 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44350-201ENSMUST00000197197 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44390-201ENSMUST00000197533 144 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44313-201ENSMUST00000198018 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44486-201ENSMUST00000198508 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44314-201ENSMUST00000199263 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44394-201ENSMUST00000199558 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44484-201ENSMUST00000199873 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44466-201ENSMUST00000200264 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm44359-201ENSMUST00000200671 138 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms