Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.93□□□□□ -0.02
Ebf1Q07802 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.93□□□□□ -0.02
Ebf1Q07802 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Gm11424-201ENSMUST00000121929 829 ntBASIC14.93□□□□□ -0.02
Ebf1Q07802 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.93□□□□□ -0.02
Ebf1Q07802 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Gm25144-201ENSMUST00000179561 110 ntBASIC14.93□□□□□ -0.02
Ebf1Q07802 Gm25352-201ENSMUST00000179815 110 ntBASIC14.93□□□□□ -0.02
Ebf1Q07802 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.93□□□□□ -0.02
Ebf1Q07802 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf1Q07802 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf1Q07802 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.92□□□□□ -0.02
Ebf1Q07802 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf1Q07802 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.92□□□□□ -0.02
Ebf1Q07802 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ebf1Q07802 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf1Q07802 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ebf1Q07802 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ebf1Q07802 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Ebf1Q07802 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.91□□□□□ -0.02
Ebf1Q07802 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ebf1Q07802 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.91□□□□□ -0.02
Ebf1Q07802 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.91□□□□□ -0.02
Ebf1Q07802 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Gm18049-201ENSMUST00000208909 581 ntBASIC14.91□□□□□ -0.02
Ebf1Q07802 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.91□□□□□ -0.02
Ebf1Q07802 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ebf1Q07802 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf1Q07802 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.91□□□□□ -0.02
Ebf1Q07802 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms