Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.66□□□□□ -0.7
Hspg2Q05793 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Gm6222-201ENSMUST00000120787 396 ntBASIC10.66□□□□□ -0.7
Hspg2Q05793 Gm27839-201ENSMUST00000184242 106 ntBASIC10.66□□□□□ -0.7
Hspg2Q05793 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.66□□□□□ -0.7
Hspg2Q05793 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.66□□□□□ -0.7
Hspg2Q05793 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.65□□□□□ -0.7
Hspg2Q05793 Gm37259-201ENSMUST00000193903 849 ntBASIC10.65□□□□□ -0.7
Hspg2Q05793 Gm6916-202ENSMUST00000205523 195 ntBASIC10.65□□□□□ -0.7
Hspg2Q05793 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Hspg2Q05793 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.65□□□□□ -0.7
Hspg2Q05793 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hspg2Q05793 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.65□□□□□ -0.7
Hspg2Q05793 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Hspg2Q05793 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.65□□□□□ -0.7
Hspg2Q05793 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.65□□□□□ -0.7
Hspg2Q05793 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Gm24526-201ENSMUST00000082921 158 ntBASIC10.65□□□□□ -0.7
Hspg2Q05793 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hspg2Q05793 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.71
Hspg2Q05793 Gm43072-201ENSMUST00000200283 1671 ntBASIC10.65□□□□□ -0.71
Hspg2Q05793 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Hspg2Q05793 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hspg2Q05793 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Hspg2Q05793 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hspg2Q05793 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hspg2Q05793 Gm5356-201ENSMUST00000093326 615 ntBASIC10.65□□□□□ -0.71
Hspg2Q05793 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.64□□□□□ -0.71
Hspg2Q05793 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.64□□□□□ -0.71
Hspg2Q05793 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.64□□□□□ -0.71
Hspg2Q05793 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Celf4-206ENSMUST00000224553 1729 ntBASIC10.64□□□□□ -0.71
Hspg2Q05793 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hspg2Q05793 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.63□□□□□ -0.71
Hspg2Q05793 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms