Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.38□□□□□ -0.11
Col9a1Q05722 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.38□□□□□ -0.11
Col9a1Q05722 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Gm6082-201ENSMUST00000215204 454 ntBASIC14.38□□□□□ -0.11
Col9a1Q05722 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a1Q05722 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.38□□□□□ -0.11
Col9a1Q05722 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.38□□□□□ -0.11
Col9a1Q05722 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col9a1Q05722 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.37□□□□□ -0.11
Col9a1Q05722 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm2495-201ENSMUST00000191160 466 ntBASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm6334-201ENSMUST00000207083 228 ntBASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm8463-201ENSMUST00000208573 613 ntBASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm19540-201ENSMUST00000221843 810 ntBASIC14.37□□□□□ -0.11
Col9a1Q05722 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.37□□□□□ -0.11
Col9a1Q05722 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Gm26226-201ENSMUST00000082509 116 ntBASIC14.37□□□□□ -0.11
Col9a1Q05722 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col9a1Q05722 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col9a1Q05722 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Col9a1Q05722 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm22709-201ENSMUST00000116893 111 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm6222-201ENSMUST00000120787 396 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm17376-201ENSMUST00000166016 84 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm8810-201ENSMUST00000172895 754 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm22119-201ENSMUST00000175594 99 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.36□□□□□ -0.11
Col9a1Q05722 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col9a1Q05722 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col9a1Q05722 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col9a1Q05722 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms