Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.03□□□□□ -0.16
Cxcr5Q04683 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.03□□□□□ -0.16
Cxcr5Q04683 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.03□□□□□ -0.16
Cxcr5Q04683 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.03□□□□□ -0.16
Cxcr5Q04683 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cxcr5Q04683 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcr5Q04683 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Gm11764-201ENSMUST00000120221 623 ntBASIC14.02□□□□□ -0.17
Cxcr5Q04683 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcr5Q04683 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.01□□□□□ -0.17
Cxcr5Q04683 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcr5Q04683 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms