Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.8□□□□□ -0.04
Pfdn6Q03958 Gm12350-201ENSMUST00000121208 462 ntBASIC14.8□□□□□ -0.04
Pfdn6Q03958 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Gm27741-201ENSMUST00000185060 237 ntBASIC14.8□□□□□ -0.04
Pfdn6Q03958 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.79□□□□□ -0.04
Pfdn6Q03958 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.79□□□□□ -0.04
Pfdn6Q03958 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.79□□□□□ -0.04
Pfdn6Q03958 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.79□□□□□ -0.04
Pfdn6Q03958 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.79□□□□□ -0.04
Pfdn6Q03958 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.78□□□□□ -0.04
Pfdn6Q03958 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.78□□□□□ -0.04
Pfdn6Q03958 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pfdn6Q03958 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pfdn6Q03958 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.77□□□□□ -0.04
Pfdn6Q03958 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pfdn6Q03958 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pfdn6Q03958 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.77□□□□□ -0.04
Pfdn6Q03958 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pfdn6Q03958 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms