Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SgcaP82350 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.36□□□□□ -0.43
SgcaP82350 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.36□□□□□ -0.43
SgcaP82350 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcaP82350 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcaP82350 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SgcaP82350 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.35□□□□□ -0.43
SgcaP82350 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.35□□□□□ -0.43
SgcaP82350 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Gm12008-201ENSMUST00000117791 755 ntBASIC12.35□□□□□ -0.43
SgcaP82350 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.35□□□□□ -0.43
SgcaP82350 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.35□□□□□ -0.43
SgcaP82350 Mir6982-201ENSMUST00000184354 68 ntBASIC12.35□□□□□ -0.43
SgcaP82350 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.35□□□□□ -0.43
SgcaP82350 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcaP82350 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcaP82350 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.34□□□□□ -0.43
SgcaP82350 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SgcaP82350 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
SgcaP82350 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms