Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.56□□□□□ -0.08
Shox2P70390 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.55□□□□□ -0.08
Shox2P70390 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.55□□□□□ -0.08
Shox2P70390 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.55□□□□□ -0.08
Shox2P70390 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Shox2P70390 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.55□□□□□ -0.08
Shox2P70390 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.55□□□□□ -0.08
Shox2P70390 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.55□□□□□ -0.08
Shox2P70390 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.55□□□□□ -0.08
Shox2P70390 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.55□□□□□ -0.08
Shox2P70390 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Shox2P70390 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Shox2P70390 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.55□□□□□ -0.08
Shox2P70390 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shox2P70390 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.55□□□□□ -0.08
Shox2P70390 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Shox2P70390 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Shox2P70390 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Shox2P70390 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Gm13559-201ENSMUST00000120476 863 ntBASIC14.54□□□□□ -0.08
Shox2P70390 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.54□□□□□ -0.08
Shox2P70390 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.54□□□□□ -0.08
Shox2P70390 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Shox2P70390 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Shox2P70390 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Shox2P70390 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Shox2P70390 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shox2P70390 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Shox2P70390 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Shox2P70390 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.53□□□□□ -0.08
Shox2P70390 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Shox2P70390 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.53□□□□□ -0.08
Shox2P70390 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.53□□□□□ -0.08
Shox2P70390 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.53□□□□□ -0.08
Shox2P70390 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Shox2P70390 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.53□□□□□ -0.08
Shox2P70390 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.53□□□□□ -0.08
Shox2P70390 Gm15358-201ENSMUST00000119249 520 ntBASIC14.53□□□□□ -0.08
Shox2P70390 Gm10499-201ENSMUST00000174094 934 ntBASIC14.53□□□□□ -0.08
Shox2P70390 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Shox2P70390 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms