Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msx3P70354 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.14■□□□□ 0.01
Msx3P70354 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msx3P70354 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.14■□□□□ 0.01
Msx3P70354 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msx3P70354 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.14■□□□□ 0.01
Msx3P70354 Thap2-203ENSMUST00000218989 527 ntBASIC15.14■□□□□ 0.01
Msx3P70354 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.14■□□□□ 0.01
Msx3P70354 Mzt1-203ENSMUST00000227948 952 ntBASIC15.14■□□□□ 0.01
Msx3P70354 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msx3P70354 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msx3P70354 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Msx3P70354 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.14■□□□□ 0.01
Msx3P70354 Gm10154-201ENSMUST00000084445 354 ntBASIC15.14■□□□□ 0.01
Msx3P70354 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msx3P70354 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.14■□□□□ 0.01
Msx3P70354 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Msx3P70354 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.14■□□□□ 0.01
Msx3P70354 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msx3P70354 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Msx3P70354 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.14■□□□□ 0.01
Msx3P70354 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.14■□□□□ 0.01
Msx3P70354 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.13■□□□□ 0.01
Msx3P70354 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Gm14140-201ENSMUST00000119999 995 ntBASIC15.13■□□□□ 0.01
Msx3P70354 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Gm16026-204ENSMUST00000162652 683 ntBASIC15.13■□□□□ 0.01
Msx3P70354 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.13■□□□□ 0.01
Msx3P70354 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.13■□□□□ 0.01
Msx3P70354 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Msx3P70354 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Msx3P70354 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msx3P70354 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Msx3P70354 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msx3P70354 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msx3P70354 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.12■□□□□ 0.01
Msx3P70354 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.12■□□□□ 0.01
Msx3P70354 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.12■□□□□ 0.01
Msx3P70354 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.12■□□□□ 0.01
Msx3P70354 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.12■□□□□ 0.01
Msx3P70354 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msx3P70354 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.12■□□□□ 0.01
Msx3P70354 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msx3P70354 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msx3P70354 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msx3P70354 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.11■□□□□ 0.01
Msx3P70354 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Msx3P70354 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msx3P70354 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msx3P70354 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msx3P70354 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msx3P70354 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msx3P70354 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msx3P70354 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.11■□□□□ 0.01
Msx3P70354 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Msx3P70354 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msx3P70354 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms