Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh2P43247 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Msh2P43247 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Msh2P43247 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Msh2P43247 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Msh2P43247 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.19■□□□□ 0.02
Msh2P43247 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.19■□□□□ 0.02
Msh2P43247 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Msh2P43247 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.19■□□□□ 0.02
Msh2P43247 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Msh2P43247 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.19■□□□□ 0.02
Msh2P43247 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh2P43247 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Msh2P43247 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
Msh2P43247 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Msh2P43247 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.18■□□□□ 0.02
Msh2P43247 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.18■□□□□ 0.02
Msh2P43247 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.18■□□□□ 0.02
Msh2P43247 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Msh2P43247 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.18■□□□□ 0.02
Msh2P43247 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.18■□□□□ 0.02
Msh2P43247 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.18■□□□□ 0.02
Msh2P43247 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Msh2P43247 Gm37153-201ENSMUST00000193637 231 ntBASIC15.18■□□□□ 0.02
Msh2P43247 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.18■□□□□ 0.02
Msh2P43247 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Gm15590-201ENSMUST00000078419 552 ntBASIC15.18■□□□□ 0.02
Msh2P43247 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Msh2P43247 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.18■□□□□ 0.02
Msh2P43247 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh2P43247 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.17■□□□□ 0.02
Msh2P43247 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Msh2P43247 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.17■□□□□ 0.02
Msh2P43247 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Msh2P43247 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.17■□□□□ 0.02
Msh2P43247 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.17■□□□□ 0.02
Msh2P43247 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.17■□□□□ 0.02
Msh2P43247 Gm13036-201ENSMUST00000117799 748 ntBASIC15.17■□□□□ 0.02
Msh2P43247 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.17■□□□□ 0.02
Msh2P43247 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.17■□□□□ 0.02
Msh2P43247 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.17■□□□□ 0.02
Msh2P43247 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.17■□□□□ 0.02
Msh2P43247 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.17■□□□□ 0.02
Msh2P43247 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.17■□□□□ 0.02
Msh2P43247 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms