Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hoxc11P31313 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc11P31313 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hoxc11P31313 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Mir449b-201ENSMUST00000104833 80 ntBASIC14.28□□□□□ -0.12
Hoxc11P31313 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Gm18737-201ENSMUST00000173594 937 ntBASIC14.28□□□□□ -0.12
Hoxc11P31313 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Gm25948-201ENSMUST00000175334 112 ntBASIC14.28□□□□□ -0.12
Hoxc11P31313 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc11P31313 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc11P31313 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.27□□□□□ -0.12
Hoxc11P31313 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.27□□□□□ -0.12
Hoxc11P31313 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.27□□□□□ -0.12
Hoxc11P31313 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc11P31313 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.27□□□□□ -0.12
Hoxc11P31313 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxc11P31313 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Gm16026-204ENSMUST00000162652 683 ntBASIC14.27□□□□□ -0.13
Hoxc11P31313 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hoxc11P31313 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc11P31313 Gm10253-201ENSMUST00000194270 940 ntBASIC14.27□□□□□ -0.13
Hoxc11P31313 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc11P31313 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc11P31313 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Hoxc11P31313 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hoxc11P31313 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc11P31313 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc11P31313 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc11P31313 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc11P31313 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms