Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.75□□□□□ -0.21
Clk1P22518 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Gm10499-201ENSMUST00000174094 934 ntBASIC13.75□□□□□ -0.21
Clk1P22518 Gm45167-201ENSMUST00000208007 322 ntBASIC13.75□□□□□ -0.21
Clk1P22518 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.75□□□□□ -0.21
Clk1P22518 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Clk1P22518 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Clk1P22518 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Clk1P22518 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.74□□□□□ -0.21
Clk1P22518 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.74□□□□□ -0.21
Clk1P22518 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.74□□□□□ -0.21
Clk1P22518 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.74□□□□□ -0.21
Clk1P22518 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Clk1P22518 Gm15590-201ENSMUST00000078419 552 ntBASIC13.74□□□□□ -0.21
Clk1P22518 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Clk1P22518 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Clk1P22518 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.74□□□□□ -0.21
Clk1P22518 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Clk1P22518 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clk1P22518 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Clk1P22518 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.73□□□□□ -0.21
Clk1P22518 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.73□□□□□ -0.21
Clk1P22518 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Clk1P22518 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Clk1P22518 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Clk1P22518 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.73□□□□□ -0.21
Clk1P22518 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.73□□□□□ -0.21
Clk1P22518 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.73□□□□□ -0.21
Clk1P22518 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.73□□□□□ -0.21
Clk1P22518 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.73□□□□□ -0.21
Clk1P22518 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clk1P22518 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clk1P22518 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.73□□□□□ -0.21
Clk1P22518 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Clk1P22518 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clk1P22518 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Clk1P22518 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Clk1P22518 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.72□□□□□ -0.21
Clk1P22518 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms