Protein–RNA interactions for Protein: P10404

MLV-related proviral Env polyprotein, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P10404 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.58□□□□□ -0.4
P10404 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.58□□□□□ -0.4
P10404 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
P10404 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.58□□□□□ -0.4
P10404 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.58□□□□□ -0.4
P10404 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.58□□□□□ -0.4
P10404 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.58□□□□□ -0.4
P10404 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.58□□□□□ -0.4
P10404 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P10404 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.58□□□□□ -0.4
P10404 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.57□□□□□ -0.4
P10404 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.57□□□□□ -0.4
P10404 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P10404 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Gm10499-201ENSMUST00000174094 934 ntBASIC12.57□□□□□ -0.4
P10404 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Gm27628-201ENSMUST00000184911 107 ntBASIC12.57□□□□□ -0.4
P10404 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.57□□□□□ -0.4
P10404 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.57□□□□□ -0.4
P10404 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.57□□□□□ -0.4
P10404 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
P10404 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
P10404 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
P10404 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
P10404 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P10404 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.56□□□□□ -0.4
P10404 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P10404 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
P10404 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.56□□□□□ -0.4
P10404 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
P10404 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
P10404 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.56□□□□□ -0.4
P10404 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.56□□□□□ -0.4
P10404 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.56□□□□□ -0.4
P10404 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.56□□□□□ -0.4
P10404 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.56□□□□□ -0.4
P10404 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.56□□□□□ -0.4
P10404 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
P10404 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P10404 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.56□□□□□ -0.4
P10404 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P10404 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P10404 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms