Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
PrnpP04925 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PrnpP04925 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PrnpP04925 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PrnpP04925 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PrnpP04925 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PrnpP04925 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PrnpP04925 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PrnpP04925 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PrnpP04925 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PrnpP04925 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PrnpP04925 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.19■□□□□ 0.02
PrnpP04925 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.19■□□□□ 0.02
PrnpP04925 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PrnpP04925 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.19■□□□□ 0.02
PrnpP04925 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PrnpP04925 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PrnpP04925 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PrnpP04925 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.18■□□□□ 0.02
PrnpP04925 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PrnpP04925 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PrnpP04925 Gm12091-201ENSMUST00000146791 830 ntBASIC15.18■□□□□ 0.02
PrnpP04925 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.18■□□□□ 0.02
PrnpP04925 Gm43433-201ENSMUST00000196573 481 ntBASIC15.18■□□□□ 0.02
PrnpP04925 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PrnpP04925 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PrnpP04925 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PrnpP04925 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
PrnpP04925 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrnpP04925 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PrnpP04925 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PrnpP04925 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.17■□□□□ 0.02
PrnpP04925 Gm11478-201ENSMUST00000117851 599 ntBASIC15.17■□□□□ 0.02
PrnpP04925 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.17■□□□□ 0.02
PrnpP04925 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.17■□□□□ 0.02
PrnpP04925 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Gm21854-201ENSMUST00000179901 471 ntBASIC15.17■□□□□ 0.02
PrnpP04925 Gm28760-201ENSMUST00000185995 736 ntBASIC15.17■□□□□ 0.02
PrnpP04925 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.17■□□□□ 0.02
PrnpP04925 Gm37917-201ENSMUST00000194711 392 ntBASIC15.17■□□□□ 0.02
PrnpP04925 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Gm45668-201ENSMUST00000211271 493 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms