Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P04224 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P04224 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P04224 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
P04224 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
P04224 Gm11950-201ENSMUST00000121615 838 ntBASIC12.94□□□□□ -0.34
P04224 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
P04224 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P04224 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.94□□□□□ -0.34
P04224 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.94□□□□□ -0.34
P04224 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
P04224 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
P04224 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P04224 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
P04224 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
P04224 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.93□□□□□ -0.34
P04224 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.93□□□□□ -0.34
P04224 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.93□□□□□ -0.34
P04224 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.93□□□□□ -0.34
P04224 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.93□□□□□ -0.34
P04224 Gm6345-202ENSMUST00000180900 204 ntBASIC12.93□□□□□ -0.34
P04224 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.93□□□□□ -0.34
P04224 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.93□□□□□ -0.34
P04224 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.93□□□□□ -0.34
P04224 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
P04224 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P04224 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P04224 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.92□□□□□ -0.34
P04224 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.92□□□□□ -0.34
P04224 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
P04224 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms