Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CopeO89079 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CopeO89079 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CopeO89079 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.21■□□□□ 0.03
CopeO89079 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CopeO89079 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.21■□□□□ 0.03
CopeO89079 Mir7071-201ENSMUST00000184847 69 ntBASIC15.21■□□□□ 0.03
CopeO89079 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.21■□□□□ 0.03
CopeO89079 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.21■□□□□ 0.03
CopeO89079 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.21■□□□□ 0.03
CopeO89079 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
CopeO89079 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.21■□□□□ 0.03
CopeO89079 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.21■□□□□ 0.03
CopeO89079 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CopeO89079 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CopeO89079 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
CopeO89079 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CopeO89079 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CopeO89079 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.21■□□□□ 0.02
CopeO89079 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CopeO89079 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CopeO89079 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.2■□□□□ 0.02
CopeO89079 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CopeO89079 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CopeO89079 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CopeO89079 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.2■□□□□ 0.02
CopeO89079 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CopeO89079 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CopeO89079 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CopeO89079 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
CopeO89079 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.19■□□□□ 0.02
CopeO89079 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CopeO89079 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Gm14859-201ENSMUST00000117752 357 ntBASIC15.19■□□□□ 0.02
CopeO89079 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.19■□□□□ 0.02
CopeO89079 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.19■□□□□ 0.02
CopeO89079 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.19■□□□□ 0.02
CopeO89079 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CopeO89079 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.19■□□□□ 0.02
CopeO89079 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CopeO89079 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CopeO89079 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CopeO89079 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CopeO89079 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CopeO89079 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CopeO89079 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CopeO89079 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CopeO89079 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.18■□□□□ 0.02
CopeO89079 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms