Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.63□□□□□ -0.23
Cops4O88544 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cops4O88544 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.63□□□□□ -0.23
Cops4O88544 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.63□□□□□ -0.23
Cops4O88544 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Gm25745-201ENSMUST00000174945 133 ntBASIC13.63□□□□□ -0.23
Cops4O88544 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.63□□□□□ -0.23
Cops4O88544 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.63□□□□□ -0.23
Cops4O88544 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.63□□□□□ -0.23
Cops4O88544 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.63□□□□□ -0.23
Cops4O88544 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.63□□□□□ -0.23
Cops4O88544 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.63□□□□□ -0.23
Cops4O88544 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.63□□□□□ -0.23
Cops4O88544 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.63□□□□□ -0.23
Cops4O88544 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cops4O88544 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.63□□□□□ -0.23
Cops4O88544 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.62□□□□□ -0.23
Cops4O88544 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Cops4O88544 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Cops4O88544 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cops4O88544 Gm27867-201ENSMUST00000184778 125 ntBASIC13.62□□□□□ -0.23
Cops4O88544 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.62□□□□□ -0.23
Cops4O88544 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cops4O88544 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cops4O88544 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cops4O88544 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.61□□□□□ -0.23
Cops4O88544 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.61□□□□□ -0.23
Cops4O88544 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.61□□□□□ -0.23
Cops4O88544 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.61□□□□□ -0.23
Cops4O88544 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.61□□□□□ -0.23
Cops4O88544 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cops4O88544 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.61□□□□□ -0.23
Cops4O88544 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cops4O88544 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Cops4O88544 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops4O88544 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops4O88544 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.6□□□□□ -0.23
Cops4O88544 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.6□□□□□ -0.23
Cops4O88544 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cops4O88544 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms