Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NlkO54949 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.21□□□□□ -0.3
NlkO54949 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
NlkO54949 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
NlkO54949 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NlkO54949 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
NlkO54949 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NlkO54949 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Acot6-202ENSMUST00000222921 3622 ntBASIC13.2□□□□□ -0.3
NlkO54949 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
NlkO54949 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Carlr-201ENSMUST00000181515 2574 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
NlkO54949 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm12644-201ENSMUST00000119935 606 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.2□□□□□ -0.3
NlkO54949 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm8825-201ENSMUST00000182565 998 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm4518-201ENSMUST00000182638 718 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm28033-201ENSMUST00000184224 96 ntBASIC13.2□□□□□ -0.3
NlkO54949 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.2□□□□□ -0.3
NlkO54949 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.2□□□□□ -0.3
NlkO54949 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
NlkO54949 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.2□□□□□ -0.3
NlkO54949 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.2□□□□□ -0.3
NlkO54949 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.2□□□□□ -0.3
NlkO54949 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NlkO54949 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.2□□□□□ -0.3
NlkO54949 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NlkO54949 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NlkO54949 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.19□□□□□ -0.3
NlkO54949 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
NlkO54949 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
NlkO54949 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.19□□□□□ -0.3
NlkO54949 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NlkO54949 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.19□□□□□ -0.3
NlkO54949 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NlkO54949 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NlkO54949 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
NlkO54949 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NlkO54949 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms