Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.11□□□□□ -0.31
Lsm2O35900 Gm27646-201ENSMUST00000183989 110 ntBASIC13.11□□□□□ -0.31
Lsm2O35900 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm2O35900 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm2O35900 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Lsm2O35900 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm2O35900 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm2O35900 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.09□□□□□ -0.31
Lsm2O35900 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.09□□□□□ -0.31
Lsm2O35900 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Lsm2O35900 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.09□□□□□ -0.31
Lsm2O35900 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Lsm2O35900 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm2O35900 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
Lsm2O35900 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.08□□□□□ -0.31
Lsm2O35900 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.08□□□□□ -0.31
Lsm2O35900 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.08□□□□□ -0.32
Lsm2O35900 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.08□□□□□ -0.32
Lsm2O35900 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Gm27742-201ENSMUST00000184667 60 ntBASIC13.08□□□□□ -0.32
Lsm2O35900 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lsm2O35900 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.08□□□□□ -0.32
Lsm2O35900 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm2O35900 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Lsm2O35900 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms