Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk4O35493 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.18□□□□□ -0.14
Clk4O35493 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk4O35493 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.18□□□□□ -0.14
Clk4O35493 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.18□□□□□ -0.14
Clk4O35493 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.18□□□□□ -0.14
Clk4O35493 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.18□□□□□ -0.14
Clk4O35493 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Clk4O35493 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.18□□□□□ -0.14
Clk4O35493 Mir3113-201ENSMUST00000175478 76 ntBASIC14.18□□□□□ -0.14
Clk4O35493 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.18□□□□□ -0.14
Clk4O35493 Gm27301-201ENSMUST00000184012 127 ntBASIC14.18□□□□□ -0.14
Clk4O35493 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.18□□□□□ -0.14
Clk4O35493 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clk4O35493 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clk4O35493 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.18□□□□□ -0.14
Clk4O35493 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.18□□□□□ -0.14
Clk4O35493 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.18□□□□□ -0.14
Clk4O35493 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.17□□□□□ -0.14
Clk4O35493 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.17□□□□□ -0.14
Clk4O35493 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.17□□□□□ -0.14
Clk4O35493 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clk4O35493 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Clk4O35493 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.17□□□□□ -0.14
Clk4O35493 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.17□□□□□ -0.14
Clk4O35493 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.17□□□□□ -0.14
Clk4O35493 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clk4O35493 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clk4O35493 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.17□□□□□ -0.14
Clk4O35493 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clk4O35493 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.17□□□□□ -0.14
Clk4O35493 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.16□□□□□ -0.14
Clk4O35493 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.16□□□□□ -0.14
Clk4O35493 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clk4O35493 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.16□□□□□ -0.14
Clk4O35493 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clk4O35493 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Clk4O35493 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.16□□□□□ -0.14
Clk4O35493 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Gm14494-201ENSMUST00000118786 435 ntBASIC14.16□□□□□ -0.14
Clk4O35493 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Gm43767-201ENSMUST00000198933 381 ntBASIC14.16□□□□□ -0.14
Clk4O35493 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.16□□□□□ -0.14
Clk4O35493 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.16□□□□□ -0.14
Clk4O35493 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.16□□□□□ -0.14
Clk4O35493 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk4O35493 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms