Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Gm5417-201ENSMUST00000079706 384 ntBASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim55G3X8Y1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Gm7791-201ENSMUST00000219066 539 ntBASIC15.16■□□□□ 0.02
Trim55G3X8Y1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Trim55G3X8Y1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms