Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.66■□□□□ 0.42
NpcdF8VQB8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.66■□□□□ 0.42
NpcdF8VQB8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.66■□□□□ 0.42
NpcdF8VQB8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.66■□□□□ 0.42
NpcdF8VQB8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NpcdF8VQB8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Prob1-201ENSMUST00000097619 3021 ntBASIC17.65■□□□□ 0.42
NpcdF8VQB8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.65■□□□□ 0.42
NpcdF8VQB8 Gm27701-201ENSMUST00000184498 110 ntBASIC17.65■□□□□ 0.42
NpcdF8VQB8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NpcdF8VQB8 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.65■□□□□ 0.42
NpcdF8VQB8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NpcdF8VQB8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NpcdF8VQB8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
NpcdF8VQB8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.64■□□□□ 0.41
NpcdF8VQB8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Gm27892-201ENSMUST00000185017 106 ntBASIC17.64■□□□□ 0.41
NpcdF8VQB8 Gm9229-201ENSMUST00000222777 126 ntBASIC17.64■□□□□ 0.41
NpcdF8VQB8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.64■□□□□ 0.41
NpcdF8VQB8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NpcdF8VQB8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Gm12957-201ENSMUST00000117835 377 ntBASIC17.63■□□□□ 0.41
NpcdF8VQB8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.63■□□□□ 0.41
NpcdF8VQB8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.63■□□□□ 0.41
NpcdF8VQB8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms