Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdr1E9Q0B4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdr1E9Q0B4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Mir5130-201ENSMUST00000175160 84 ntBASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Gm30025-201ENSMUST00000218555 728 ntBASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Cdr1E9Q0B4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Matn2-206ENSMUST00000228570 2798 ntBASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdr1E9Q0B4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Gm13168-201ENSMUST00000121771 632 ntBASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Gm5417-201ENSMUST00000079706 384 ntBASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdr1E9Q0B4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms