Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Gm12928-201ENSMUST00000117115 573 ntBASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Gm43179-201ENSMUST00000198797 275 ntBASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.35■□□□□ 0.85
Hfm1D3Z4R1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Gm11661-201ENSMUST00000121761 1327 ntBASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Gm26464-201ENSMUST00000157094 305 ntBASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 AC192088.1-201ENSMUST00000227561 301 ntBASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hfm1D3Z4R1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hfm1D3Z4R1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hfm1D3Z4R1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.33■□□□□ 0.85
Hfm1D3Z4R1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hfm1D3Z4R1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hfm1D3Z4R1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Hfm1D3Z4R1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hfm1D3Z4R1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Hfm1D3Z4R1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Gm44974-201ENSMUST00000206387 1279 ntBASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hfm1D3Z4R1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms