Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.21■□□□□ 0.34
Usp42B2RQC2 Gm9182-201ENSMUST00000217829 639 ntBASIC17.21■□□□□ 0.34
Usp42B2RQC2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Usp42B2RQC2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.2■□□□□ 0.34
Usp42B2RQC2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.2■□□□□ 0.34
Usp42B2RQC2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.2■□□□□ 0.34
Usp42B2RQC2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Gm23935-201ENSMUST00000102303 57 ntBASIC17.2■□□□□ 0.34
Usp42B2RQC2 Gm24270-201ENSMUST00000102326 57 ntBASIC17.2■□□□□ 0.34
Usp42B2RQC2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Gm24245-201ENSMUST00000157318 57 ntBASIC17.2■□□□□ 0.34
Usp42B2RQC2 Mir6990-201ENSMUST00000183724 91 ntBASIC17.2■□□□□ 0.34
Usp42B2RQC2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp42B2RQC2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.19■□□□□ 0.34
Usp42B2RQC2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Gm44335-201ENSMUST00000196879 141 ntBASIC17.19■□□□□ 0.34
Usp42B2RQC2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Gm44297-201ENSMUST00000198304 141 ntBASIC17.19■□□□□ 0.34
Usp42B2RQC2 Gm44346-201ENSMUST00000198851 141 ntBASIC17.19■□□□□ 0.34
Usp42B2RQC2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp42B2RQC2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp42B2RQC2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.18■□□□□ 0.34
Usp42B2RQC2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp42B2RQC2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms