Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.68■□□□□ 0.58
Scn7aB1AYL1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.68■□□□□ 0.58
Scn7aB1AYL1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn7aB1AYL1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Gm4984-201ENSMUST00000115987 360 ntBASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Gm18905-201ENSMUST00000205454 928 ntBASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn7aB1AYL1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm13829-201ENSMUST00000119600 138 ntBASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm27839-201ENSMUST00000184242 106 ntBASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm18307-201ENSMUST00000206864 949 ntBASIC18.66■□□□□ 0.58
Scn7aB1AYL1 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.66■□□□□ 0.58
Scn7aB1AYL1 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm24196-201ENSMUST00000179161 110 ntBASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn7aB1AYL1 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Gm12390-201ENSMUST00000117897 397 ntBASIC18.65■□□□□ 0.58
Scn7aB1AYL1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn7aB1AYL1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn7aB1AYL1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Scn7aB1AYL1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Scn7aB1AYL1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.64■□□□□ 0.57
Scn7aB1AYL1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Gm2445-201ENSMUST00000182798 989 ntBASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms