Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Gm43767-201ENSMUST00000198933 381 ntBASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Matn2-206ENSMUST00000228570 2798 ntBASIC11.92□□□□□ -0.5
Gm12887B1AVM1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm12887B1AVM1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Gm9013-201ENSMUST00000132939 882 ntBASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm12887B1AVM1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms