Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Efs-202ENSMUST00000227037 2540 ntBASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3550W4VSN7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3550W4VSN7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Gm3550W4VSN7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3550W4VSN7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Gm3550W4VSN7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3550W4VSN7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3550W4VSN7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3550W4VSN7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3550W4VSN7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Gm45167-201ENSMUST00000208007 322 ntBASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3550W4VSN7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.51□□□□□ -0.41
Gm3550W4VSN7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Gm43767-201ENSMUST00000198933 381 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms