Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac6Q9Z2V5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Gm15678-201ENSMUST00000117573 960 ntBASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Gm10275-202ENSMUST00000168697 495 ntBASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Gm10275-201ENSMUST00000092620 635 ntBASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hdac6Q9Z2V5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Gm12341-201ENSMUST00000119724 503 ntBASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Gm27701-201ENSMUST00000184498 110 ntBASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hdac6Q9Z2V5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hdac6Q9Z2V5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac6Q9Z2V5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.33■□□□□ 0.53
Hdac6Q9Z2V5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac6Q9Z2V5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.33■□□□□ 0.53
Hdac6Q9Z2V5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac6Q9Z2V5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac6Q9Z2V5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hdac6Q9Z2V5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Gm28911-201ENSMUST00000188837 117 ntBASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Gm43630-201ENSMUST00000201550 776 ntBASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hdac6Q9Z2V5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms