Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Gm28760-201ENSMUST00000185995 736 ntBASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Gm10275-201ENSMUST00000092620 635 ntBASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lgr5Q9Z1P4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Gm37917-201ENSMUST00000194711 392 ntBASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 AA619741-201ENSMUST00000195095 646 ntBASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Gm15823-201ENSMUST00000064305 670 ntBASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lgr5Q9Z1P4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Gm45384-201ENSMUST00000210451 277 ntBASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lgr5Q9Z1P4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Gm18624-201ENSMUST00000220966 658 ntBASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lgr5Q9Z1P4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms