Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40aQ9R1C7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.24■□□□□ 0.19
Prpf40aQ9R1C7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40aQ9R1C7 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.24■□□□□ 0.19
Prpf40aQ9R1C7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40aQ9R1C7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Gm12260-201ENSMUST00000122447 411 ntBASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Mir8117-201ENSMUST00000184773 107 ntBASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf40aQ9R1C7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Gm2272-201ENSMUST00000194903 582 ntBASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Gm43767-201ENSMUST00000198933 381 ntBASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf40aQ9R1C7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Gm15467-201ENSMUST00000120582 445 ntBASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Gm13597-201ENSMUST00000121239 375 ntBASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40aQ9R1C7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf40aQ9R1C7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf40aQ9R1C7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf40aQ9R1C7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms