Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Gm3344-201ENSMUST00000169610 603 ntBASIC13.04□□□□□ -0.32
Nubp1Q9R060 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.04□□□□□ -0.32
Nubp1Q9R060 Gm37017-201ENSMUST00000195266 747 ntBASIC13.04□□□□□ -0.32
Nubp1Q9R060 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nubp1Q9R060 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.03□□□□□ -0.32
Nubp1Q9R060 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.03□□□□□ -0.32
Nubp1Q9R060 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Gm6912-201ENSMUST00000117218 544 ntBASIC13.03□□□□□ -0.32
Nubp1Q9R060 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC13.03□□□□□ -0.32
Nubp1Q9R060 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.03□□□□□ -0.32
Nubp1Q9R060 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nubp1Q9R060 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.02□□□□□ -0.32
Nubp1Q9R060 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nubp1Q9R060 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Gm12490-201ENSMUST00000120255 560 ntBASIC13.02□□□□□ -0.33
Nubp1Q9R060 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Gm27838-201ENSMUST00000184829 128 ntBASIC13.02□□□□□ -0.33
Nubp1Q9R060 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Gm19212-201ENSMUST00000216642 862 ntBASIC13.02□□□□□ -0.33
Nubp1Q9R060 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Gm6888-201ENSMUST00000221983 706 ntBASIC13.02□□□□□ -0.33
Nubp1Q9R060 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.02□□□□□ -0.33
Nubp1Q9R060 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nubp1Q9R060 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms