Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm13744-201ENSMUST00000118953 850 ntBASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Gm15358-201ENSMUST00000119249 520 ntBASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Gm6089-201ENSMUST00000197666 938 ntBASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.24■□□□□ 0.03
Msh5Q9QUM7 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.24■□□□□ 0.03
Msh5Q9QUM7 CT009713.1-201ENSMUST00000224828 853 ntBASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Gm8318-201ENSMUST00000182954 872 ntBASIC15.23■□□□□ 0.03
Msh5Q9QUM7 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh5Q9QUM7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Gm5133-201ENSMUST00000118940 1255 ntBASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh5Q9QUM7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.21■□□□□ 0.03
Msh5Q9QUM7 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms