Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a3bpQ9EQG9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col4a3bpQ9EQG9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Col4a3bpQ9EQG9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col4a3bpQ9EQG9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col4a3bpQ9EQG9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col4a3bpQ9EQG9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a3bpQ9EQG9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a3bpQ9EQG9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms