Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm15371-201ENSMUST00000117057 784 ntBASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Gm2991-201ENSMUST00000173338 480 ntBASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Gm44397-201ENSMUST00000195950 113 ntBASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upf1Q9EPU0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Gm15376-201ENSMUST00000122258 783 ntBASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Gm10156-201ENSMUST00000122364 462 ntBASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upf1Q9EPU0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upf1Q9EPU0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Upf1Q9EPU0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upf1Q9EPU0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Upf1Q9EPU0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Gm13786-201ENSMUST00000122371 333 ntBASIC16.51■□□□□ 0.23
Upf1Q9EPU0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Gm24990-201ENSMUST00000157406 323 ntBASIC16.51■□□□□ 0.23
Upf1Q9EPU0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Gm10608-202ENSMUST00000213924 676 ntBASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Gm8598-201ENSMUST00000221184 836 ntBASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Gm8227-201ENSMUST00000223306 571 ntBASIC16.51■□□□□ 0.23
Upf1Q9EPU0 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upf1Q9EPU0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm4909-201ENSMUST00000118749 794 ntBASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm26464-201ENSMUST00000157094 305 ntBASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm6621-201ENSMUST00000193251 772 ntBASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upf1Q9EPU0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.49■□□□□ 0.23
Upf1Q9EPU0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms