Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4cQ9D7F7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Gm7230-201ENSMUST00000173026 815 ntBASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4cQ9D7F7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Gm18489-201ENSMUST00000172565 551 ntBASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4cQ9D7F7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp4cQ9D7F7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp4cQ9D7F7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp4cQ9D7F7 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Gm7222-201ENSMUST00000117512 906 ntBASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp4cQ9D7F7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms