Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Gm16026-204ENSMUST00000162652 683 ntBASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssbp3Q9D032 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Gm13365-201ENSMUST00000121188 973 ntBASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Gm20553-201ENSMUST00000204205 844 ntBASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssbp3Q9D032 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Gm44335-201ENSMUST00000196879 141 ntBASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Gm44297-201ENSMUST00000198304 141 ntBASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Gm44346-201ENSMUST00000198851 141 ntBASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.28□□□□□ -0.44
Ssbp3Q9D032 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms